Links

[Google] [SCIrUS] [Excite] [Currency Converter] [Windows] [Weather] [E-Journals] [Metro Map][Metro North]

Database Searching

NCBI

Human Genome Resources at NCBI

Ensembl Genome Browser

HUGO Gene Nomenclature Committee

The IUPHAR Compendium of Voltage-gated Ion Channels

The Genome Database

 

VectorDB - Molecular Biology Vector Sequence Database

Restriction Enzyme Database (REBASE)

Fasta Search Form

Hapmap
Blast Search Form (NCBI)

eTBlast (Blast Medline!!)

Search PROSITE (ExPASy)

Pattern search (french)

Single nucleotide Polymorphism Database

The Mammalian Gene Collection

TIGR Mouse Gene Index

VISTA

Mouse Genome Informatics (Jackson Laboratories)

The Rat Genome Database (RatMap)

The Protein Data Bank

NHLBI Programs for Genomic Applications
BRENDA (enzyme database)

Analysis

Nucleotide Sequences

Gene Discovery Page

IUPAC Codes

Sequence Manipulation Suite

The Genetic Code

Database of Codon Usage

JustBio

Genefisher: Interactive Primer Design

Primer 3

Oligo Calculator

Web Cutter
NEBcutter (New England Biolabs)
WWWtacg (restriction analysis)
WatCut (restriction analysis)
Poly-A prediction in Eukaryotic Genes
Splice Site Prediction
Promoter Scan
Signal sequences scan
Neural Network Promoter Prediction
ORF Finder

ClustalW Multiple Sequence Alignment

BoxShade
BCM Sequence Utilities
BioMath Calculators
siRNA Target Finder (GenScript)
siRNA Construct Builder (GenScript)

Protein Sequences

Amino Acid Information Form

ProtScale

Procite (ExPASy)

Protein: theoretical isoelectric point and molecular weight

PSORT: Protein Localization Sites

Secondary Structure Prediction of Membrane Proteins

Prediction of Transmembrane Helices in Membrane Proteins

Prediction of Phosphorylation Sites (NetPhos)

ClustalW Multiple Sequence Alignment

BoxShade

Hydrophobicity Profile

Network Protein Sequence Analysis (PBIL)

NCSA Biology Workbench
Peptide Antibody Design (Abie)

Reference and Utilities

Martindale's 'The Reference Desk'

The Molecular Biologist's Desk Reference

Radioactivity Calculator

Mouse Genetics: Concepts and Applications. By Lee M. Silver (online book)

Muscle Specific Regulatory Elements

Pedro's BioMolecular Research Tools

Fluorescence Resonance Energy Transfer spectroscopy

Two-hybrid screening (Lab of Erica Golemis)

Ion Channels

Companies

General

Sigma
Fisher Catalog

Antibodies

Abcam
Alomone labs
BioSource International
CHEMICON
Jackson ImmunoResearch
Molecular Probes
Sigma Antibody Explorer Web Site
Santa Cruz Biotechnology
The Antibody Resource Page
Novus Biologicals
Gallus Immunotech
Upstate
United States Biological

Molecular Biology

Amersham Pharmacia
CLONTECH
DuPont
Evrogen
Genome Systems, Inc.
Invitrogen
New England BioLabs
Novagen
OriGene Technologies
Promega
Stratagene

Patch Clamping/Fluorescence

Molecular Devices (previously Axon Instruments)
Leica
Nikon
Molecular Probes [online handbook]
IonOptix
EXFO (previously Burleigh)
TMC
Newport
Narishige
Warner Instruments
World Precision Instruments
E. W. Wright
Morrell Instruments
Dagan Corporation
Omega Optical
Chroma
Sutter Instrument
Carolina
HEKA

Protocols

Protocols Online
NWFSC
Molecular Biology Protocols
The Gietz Lab Yeast Transformation Homepage
Penn MCRC Histology and Gene Expression Protocols

Societies

American Heart Association

International Society for Heart Research

The Biophysical Society

National Institutes of Health

PC Software

GeneDoc

Prophet (data and sequence analysis)

Treeview

ClustalX [helpfile]

Chromas (Reads sequence files)

Readseq (Converts between different file formats)

Scion Image (PC version of NIH Image)

Rasmol

Redasoft Plasmid (vector drawing & sequence analysis)

Macaw (Multiple Alignments)

Swiss-PdbViewer

Qub (Single Channel Analysis)

Cabuf (Calculation of free Ca and Mg in solutions)

WinASCD (Analysis of pClamp data files)

X server

NYU

NYU eReports
JPMorgan Chase PaymentNet
American Express
NYU Directory
UPS CampusShip